Gene CAMK1c-S5_a (S.moellendorffii)

CAMK1c-S5_a

Species: S.moellendorffii
Alias: CAMK1c-S5_a
External Links:
Annotation:

Classification

Group: CAMK
Family: CAMK1
Subfamily: CAMK1c

Sequence

Name Sequence Type Origin Length Description Download
CAMK1c-S5_a.AA Protein None 224 None Fasta, JSON
CAMK1c-S5_a.NA RNA None 675 None Fasta, JSON
CAMK1c-S5_a.kin_dom Protein Kinase Domain None 96 None Fasta, JSON

Protein domain

Protein domains of CAMK1c-S5_a.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CAMK1c-S5_a.AA AGC 91-185 21 7.4e-24 57.18 In-house 266-395 (395) Show / Hide 
Range on Protein: 91-185
Range on HMM: 266-395/395
Sequence Identity: 21% (31 aa)

CG--TEKYMAPEVMARKGRKGESQSFYTAAIDVWG--LGVIAYELLKG------------------HKSRMEIDFLR------AGAFPT---------GF
||  |  |||||.             |. | | |.  ||.. ||.| |                  ..  ..    .         ||           .
CGPCTPEYMAPEIL------------YGKACDWWSFGLGCLMYEMLTGYPPFYGDNPQENRHPFRNPMEMFQKIMNGRYFINWKVKFPFPEDPQFPEDRW

GSDQAEDLLRGMLAVEPSKRVT----------LDRVLAHPWI
 |..| ||....| ..|.|| .           . . .||| 
FSPEAKDLIKKLLCKDPEKRLGCGGNDFGDKGAEEIKNHPWF
Kinase CAMK1c-S5_a.AA CAMK 76-185 23 2.7e-23 71.28 In-house 241-425 (425) Show / Hide 
Range on Protein: 76-185
Range on HMM: 241-425/425
Sequence Identity: 23% (44 aa)

GFVRERDGAK------------------------EMSKYCGTEKYMA-PEVMARKGRK------GESQSFYTAAIDVWGLGVIAYELLKG-----HKSRM
|| .. |. .                         |. .|||  ||| |||  .||..       | .  |. ..|.| .||| | .| |     .....
GFANKFDPGENNFMCSDYKGGEMHNQWTTPTEGQKMKTFCGTPEYMAAPEVLNGKGHCNMQNATDEEKPYYGPKCDMWSCGVILYIMLCGYPPFYGDCDN

EID--------------FLRAGAF--PTGFGSD-----------------------QAEDLLRGMLAVEPSKRVTLDRVLAHPWI
||                 ..| .  |  . |.                       .. ||.|.|| |.|.|| |.. .|.|||.
EICEDEWIGMNDYELFEKIMKGKYDFPPPYFSPISCNYGPEWWDDISDEFHHFVSQECKDLIRKMLQVDPEKRMTIEQCLNHPWM
Kinase CAMK1c-S5_a.AA Pkinase 87-185 23 4e-19 68.71 Pfam 168-293 (293) Show / Hide 
Range on Protein: 87-185
Range on HMM: 168-293/293
Sequence Identity: 23% (31 aa)

MSKYCGTEKYMAPEVMARKGRKGESQSFYTAAIDVWGLGVIAYELLKG-----HK------SRMEIDFLRAGAFPTGFGS--------------------
|. .|||  ||||||         ... |. ..|.|..|.| ||.| |     ..      . |.. ... |. .    .                    
MTTFCGTPWYMAPEVIR-------GGQYYGPKVDMWSCGCILYEMLCGRPPFPGHCWHDNHDQMQMICRIMGPPLHFDWPWWCSISYFFFRHWHFHWTFH

---DQAEDLLRGMLAVEPSKRVTLDRVLAHPWI
   . . |.....|.. |.|| | . .| |||.
NWSEECKDFIKWCLCKDPKKRPTAEQILQHPWF
Kinase CAMK1c-S5_a.AA Aur 155-185 45 6.4e-14 32.6 In-house 227-257 (257) Show / Hide 
Range on Protein: 155-185
Range on HMM: 227-257/257
Sequence Identity: 45% (14 aa)

SDQAEDLLRGMLAVEPSKRVTLDRVLAHPWI
|. | ||  . | ..|..|.||| ...||||
SKEAKDLISKILQHDPKQRMTLDQIMNHPWI
S_TKc CAMK1c-S5_a.AA S_TKc 20-185 17 1e-12 9.71 SMART 1-231 (231) Show / Hide 
Range on Protein: 20-185
Range on HMM: 1-231/231
Sequence Identity: 17% (45 aa)

YMRGKRLGCGGQGQVFMIHNGH--NTYAGKLFRSGSDAEREARLMSKLHACPGVVSFKGFVR-----------ER---DGAKEMSK--------------
|  .. .| |. |.|.  .. .    .| |  .   ...|| ....|   .| .| .... .           .    |  . . |              
YEILRKIGKGAFGKVYKCRHKKTGRIVAIKIIK--EHIRREIQILKK--HHPNIVKLYDVFQDDHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPEHA

------------------------------------------------YCGTEKYMAPEVMARKGRKGESQSFYTA-AIDVWGLGVIAYELLKGHK--SR
                                                .|||  ||||||.            |.  ..|.| .|.| ||.| |    . 
RFYMYQICCALEYCHSHGIIHRDLKPENILLDEHIKICDFGLARQLTTFCGTPWYMAPEVL-----------GYGKCKCDWWSCGCILYEMLCGYPPFP-

MEIDFLRAGAFPTGFGSDQAEDLLRGMLAVEPSKRVTLDRVLA-------HPWI
 .   ..         |..| |..|..| ..|.|| |   .|.       |||.
QMQMMFKKIG------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
Kinase CAMK1c-S5_a.AA CAMK1 155-185 53 1.5e-12 32.7 In-house 245-276 (276) Show / Hide 
Range on Protein: 155-185
Range on HMM: 245-276/276
Sequence Identity: 53% (17 aa)

SDQ-AEDLLRGMLAVEPSKRVTLDRVLAHPWI
||| | |....|| |.|.|| | . .|.||||
SDQEAKDFIKHMLEVDPKKRYTCEQCLNHPWI
Kinase CAMK1c-S5_a.AA MSK 90-135 44 2.7e-12 37.85 In-house 165-207 (277) Show / Hide 
Range on Protein: 90-135
Range on HMM: 165-207/277
Sequence Identity: 44% (21 aa)

YCGTEKYMAPEVMARKGRKGESQSF-YTAAIDVWGLGVIAYELLKGH
.|.|  |||||. .|    |..|   | .|.|.|.|||| |..| |.
PCFTLHYMAPEMLRR----GYAQDGGYDEACDWWSLGVILYTMLTGQ
Kinase CAMK1c-S5_a.AA RAD53 155-185 51 3.3e-12 32.12 In-house 275-305 (305) Show / Hide 
Range on Protein: 155-185
Range on HMM: 275-305/305
Sequence Identity: 51% (16 aa)

SDQAEDLLRGMLAVEPSKRVTLDRVLAHPWI
|. | || ..|| |.| || | | .| |||.
SEEAKDLIKWMLCVDPEKRYTIDEALNHPWM
Kinase CAMK1c-S5_a.AA CAMK1 87-132 43 2.1e-10 26.38 In-house 170-210 (276) Show / Hide 
Range on Protein: 87-132
Range on HMM: 170-210/276
Sequence Identity: 43% (20 aa)

MSKYCGTEKYMAPEVMARKGRKGESQSFYTAAIDVWGLGVIAYELL
|.. |||  |.|||| ..|        .|  |.|.|. ||| | ||
MKTACGTPGYVAPEVLECKK-----DKPYDKACDMWSIGVITYILL
Kinase CAMK1c-S5_a.AA Ciliate-E2 90-134 45 2.2e-10 31.81 In-house 247-292 (365) Show / Hide 
Range on Protein: 90-134
Range on HMM: 247-292/365
Sequence Identity: 45% (21 aa)

YCGTEKYMAPEVMARKGRKG-ESQSFYTAAIDVWGLGVIAYELLKG
.|||  |||||.  .|.  . . |  |. ..|.| |||| ||.| |
ICGTPGYMAPEILNGKKYDNQQKQKGYDYKCDIWSLGVILYEMLFG
Kinase CAMK1c-S5_a.AA Ciliate-E2-Unclassified 85-134 37 2.9e-10 31.83 In-house 217-266 (352) Show / Hide 
Range on Protein: 85-134
Range on HMM: 217-266/352
Sequence Identity: 37% (20 aa)

KEMSKYCGTEKYM----APEVMARKGRKGESQSFYTAAIDVWGLGVIAYELLKG
..|.  |||  ||    ||||. ...  ...      ..|.|.||||.||.| |
QMMWTFCGTPNYMPQYTAPEVLQGQNYDHSKA----YKCDIWSLGVILYEMLFG
Kinase CAMK1c-S5_a.AA RSK 90-135 36 6.6e-10 32.75 In-house 168-209 (278) Show / Hide 
Range on Protein: 90-135
Range on HMM: 168-209/278
Sequence Identity: 36% (18 aa)

YCGTEKYMAPEVMA----RKGRKGESQSFYTAAIDVWGLGVIAYELLKGH
.|.|  |||||. .    ..|        ...| |.| |||. ||.| |.
FCYTIEYMAPEMLKRANQQGG--------HDKACDWWSLGVLMYEMLTGC
Kinase CAMK1c-S5_a.AA RSK 155-185 36 8.6e-10 32.34 In-house 243-278 (278) Show / Hide 
Range on Protein: 155-185
Range on HMM: 243-278/278
Sequence Identity: 36% (13 aa)

SDQAEDLLRGMLAVEPSKRVT-----LDRVLAHPWI
|. | ||.|.|| ..|.|| .     ......|||.
SQEAKDLIRKMLHRDPHKRLGCGPQDAEEIKQHPWF
Kinase CAMK1c-S5_a.AA RSK 155-185 38 1.2e-09 30.84 In-house 236-271 (271) Show / Hide 
Range on Protein: 155-185
Range on HMM: 236-271/271
Sequence Identity: 38% (14 aa)

SDQAEDLLRGMLAVEPSKRVTL-----DRVLAHPWI
|| | ||||.|| . | .|..       ... |||.
SDEAKDLLRMMLHRDPHNRLGAGPNGVEQIKQHPWF
Kinase CAMK1c-S5_a.AA Ciliate-E2 155-185 36 4.7e-09 27.19 In-house 330-365 (365) Show / Hide 
Range on Protein: 155-185
Range on HMM: 330-365/365
Sequence Identity: 36% (13 aa)

SDQAEDLLRG----MLAVEPSKRVT-LDRVLAHPWI
|... ||..     || ..|.|| |  . .| |||.
SQECKDLIKKFGKRMLQKDPEKRITGWEQILNHPWF
Kinase CAMK1c-S5_a.AA Aur 90-135 39 1.1e-08 18.5 In-house 161-198 (257) Show / Hide 
Range on Protein: 90-135
Range on HMM: 161-198/257
Sequence Identity: 39% (18 aa)

YCGTEKYMAPEVMARKGRKGESQSFYTAAIDVWGLGVIAYELLKGH
.|||  ||.||.        |.|. .   .|.| |||..|||. |.
FCGTLDYMPPEMV-------EGQM-HDHKVDIWCLGVLCYELCHGC
Kinase CAMK1c-S5_a.AA RSK 91-135 42 3.7e-08 25.47 In-house 166-202 (271) Show / Hide 
Range on Protein: 91-135
Range on HMM: 166-202/271
Sequence Identity: 42% (19 aa)

CGTEKYMAPEVMARKGRKGESQSFYTAAIDVWGLGVIAYELLKGH
|.|  ||||||  |.|        ...| |.| .||. || | |.
CYTANYMAPEVLKRQG--------HDQACDWWSFGVLMYEMLTGC
Kinase CAMK1c-S5_a.AA Ciliate-E2-Unclassified 155-185 37 4.5e-08 24.11 In-house 318-352 (352) Show / Hide 
Range on Protein: 155-185
Range on HMM: 318-352/352
Sequence Identity: 37% (13 aa)

SDQAEDLLR----GMLAVEPSKRVTLDRVLAHPWI
|..|.|...     || . |.|| |.. .| |||.
SPEAKDFINDLLQKMLKKNPNKRITFEQILNHPWF
Kinase CAMK1c-S5_a.AA RAD53 91-136 35 1.2e-07 18.25 In-house 187-239 (305) Show / Hide 
Range on Protein: 91-136
Range on HMM: 187-239/305
Sequence Identity: 35% (19 aa)

CGTEKYMAPEVMARKGR---KGESQS----FYTAAIDVWGLGVIAYELLKGHK
|||  | |||| . ||.    . . .     || . |.| .|.| | .| |..
CGTPQYVAPEVITSKGHNCYHENEERQVQVGYTKKVDCWSMGCILYICLCGYP
Kinase CAMK1c-S5_a.AA MSK 155-185 35 4.8e-07 19.84 In-house 247-277 (277) Show / Hide 
Range on Protein: 155-185
Range on HMM: 247-277/277
Sequence Identity: 35% (11 aa)

SDQAEDLLRGMLAVEPSKRVTLDRVLAHPWI
| .| ||....| . |.|| ...  .|| |.
SPDAKDLIQWLLTKDPKKRLGMNDLRAHEWK
Kinase CAMK1c-S5_a.AA CAMK 25-74 13 0.003253 5.41 In-house 1-103 (425) Show / Hide 
Range on Protein: 25-74
Range on HMM: 1-103/425
Sequence Identity: 13% (14 aa)

RLGCGGQGQVFMIHNGHNT--------------YAGKLFR---------------------------------SGSDAEREARLMSKLHA------CPGV
 || |. |.|.   . ..|              .| |                                    .    .|| ..|.||..       | .
TLGRGSFGKVKLCIHKNTTGKERVHHIYTNGQKVAIKIIDKKKLKDKQNQDYSNCYKIDKSKCKHRYCWRRPKDRKNVRREIEIMKKLQGIGNKLDHPNI

VSF
...
IKL
Kinase CAMK1c-S5_a.AA MSK 24-49 38 0.182456 0.71 In-house 2-27 (277) Show / Hide 
Range on Protein: 24-49
Range on HMM: 2-27/277
Sequence Identity: 38% (10 aa)

KRLGCGGQGQVFMIHNGHNTYAGKLF
| || ||.| .| ..   .  .|||.
KVLGTGGYGKFFICRKCVHHDTGKLY
Pkinase CAMK1c-S5_a.AA Pkinase 20-82 20 3.125784 1.9 Pfam 1-73 (293) Show / Hide 
Range on Protein: 20-82
Range on HMM: 1-73/293
Sequence Identity: 20% (15 aa)

YMRGKRLGCGGQGQVFMIHNGHNT--YAGKLFRSGSDAE---------REARLMSKLHACPGVVSFKGFVRERD
| .|...| |. |.|.  |.  .   .| | ..  .. .         .|...| .|. .| .| ........|
YHIGRKIGSGSFGCVYKCHHKGTGKIVAVKIIKKRHEKSWKDQTHRRLSEIQIMKRLN-HPNIVRLYDWFEDKD