Gene CC1G_11152 (C.cinerea)

CC1G_11152

Species: C.cinerea
Alias: CC1G_11152
External Links:
Annotation:

Classification

Group: PKL
Family: CAK
Subfamily: CAK-fungal1

Sequence

Name Sequence Type Origin Length Description Download
CC1G_11152.AA Protein None 287 None Fasta, JSON
CC1G_11152.NA RNA None 864 None Fasta, JSON
CC1G_11152.kin_dom Protein Kinase Domain None 149 None Fasta, JSON

Protein domain

Protein domains of CC1G_11152.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
APH CC1G_11152.AA APH 84-282 17 3.9e-12 42.28 Pfam 53-248 (248) Show / Hide 
Range on Protein: 84-282
Range on HMM: 53-248/248
Sequence Identity: 17% (39 aa)

I--RVPRVLD---VFSIRGTVHIVQERIHGPVLEDVWHR-LSAEEQRSAMLQVKDCFDQLRALQPPHPERVQAVDGSGLIDSRVEKGEWGPFENHA---A
|   |||||.     .  |..  ..|...| .|...  . |...... .  .. .   .| .. ||                      . ||...    .
IPVPVPRVLWGCTDDEFHGWPWYLMEWLPGEDLWRW--HALHCAQRPALLEALARFLARLHQVDPP----------------------DCPFAWWGRWRL

FHRFLNHDI---YRAQPEKYS----RMQD-ALTKIKDKQYKSVFSHGDFGPHNLIWR---DGTIF--VIDWERSGWFPEYYDFTRAHTARGDMKDWWTKF
.|  . .|.   ... . . .    .. . ..  ... .   .. |||| |.|..|.   ||. .  ||||....| . .||. .. .   ... |    
YHWRQLMDWCRCWVDPEWFDEDRQWWLWQRLWAWLEAHWPPPCWCHGDFHPGNVMWDPRPDGGRVTGVIDWDDACWGDPHYDLAMCWWHWWCRWFW----

EEVVDRYGDELE---LEIRFCEYF
.|..|.|| . .    ... ....
PEWRDAYGRAYCRHDPDWHRMRWW