Gene CC1G_13268 (C.cinerea)

CC1G_13268

Species: C.cinerea
Alias: CC1G_13268
External Links:
Annotation:

Classification

Group: Other
Family: FunK1

Sequence

Name Sequence Type Origin Length Description Download
CC1G_13268.AA Protein None 787 None Fasta, JSON
CC1G_13268.NA RNA None 2364 None Fasta, JSON
CC1G_13268.kin_dom Protein Kinase Domain None 409 None Fasta, JSON

Protein domain

Protein domains of CC1G_13268.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
S_TKc CC1G_13268.AA S_TKc 285-667 9 2e-06 -83.14 SMART 1-231 (231) Show / Hide 
Range on Protein: 285-667
Range on HMM: 1-231/231
Sequence Identity: 9% (38 aa)

YQTLELITHYPSTSLGDRNARVWRVKRVVSPTNRERVGGEQDRVLKDLWVDQGARTEADIQEDLFEDISAVAKDENWRKKPIFQDFFERDVESLAEALQG
|. |..| .          ..|.... .            .   .| .                                    . ..| .. | .  . 
YEILRKIGKGAF-------GKVYKCRHKK---------TGRIVAIKIIK-----------------------------------EHIRREIQILKK--HH

DNFKRYFSCIIAKHVLSPSPDKRRCFFVYESVCT---PLHD------I------ATFGEVIDILRQSVTALRLMFCAGWVHRDVSTGNILALKTGSSSSW
.|  ... ..             . ..| | . .    |.|              .  ..  ...| . ||  .   | .|||.   |||  .       
PNIVKLYDVFQD----------DHLYMVMEYCDGDLGDLFDYIKKRGRHGLRFPFPE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDE-------

QVKLSDLEYSRRFPDTNLSDGEQIMGTPYFMACEIHFGKHLF-PSDPETVW----------TKRYPRRPVIHGYQHDLEGIWWIILWFSTMRIDQEDLSR
..|..|   .|..          . |||..|| |.   .. . ..|   .|          . . | .        ... .. .|.              
HIKICDFGLARQL--------TTFCGTPWYMAPEVL--GYGKCKCD---WWSCGCILYEMLCGYPPFP--------QMQMMFKKIG--------------

EFGRLHFQQPMDDHCIGRRCLLFTDQDHLAGLPTLVDSLPSELLDSNFLDELQRLKYQIHGEYIIRNAEGKQDDISTYSYVISQSFTRFFERLEESRAMW
                                                                              |    .   . ...  | |   
------------------------------------------------------------------------------SPEAKDFIRKCLQKDPEKRPTA

DDLKL-------STTA
 ..             
-EALQDEWDIKCHPWF
Kinase CC1G_13268.AA KHS 434-504 32 1.5e-05 14.45 In-house 103-167 (258) Show / Hide 
Range on Protein: 434-504
Range on HMM: 103-167/258
Sequence Identity: 32% (23 aa)

RQSVTALRLMFCAGWVHRDVSTGNILALKTGSSSSWQVKLSDLEYSRRFPDTNLSDGEQIMGTPYFMACEI
|. ...|. .   | .|||.   |||  ..|     .||| |   | .   | ..     .||||.|| |.
RETLQGLHYLHSMGKMHRDIKGANILLTDQG-----DVKLADFGVSAQITAT-IAKRKSFIGTPYWMAPEV
Kinase CC1G_13268.AA TAO 428-504 31 6.5e-05 11.66 In-house 100-166 (254) Show / Hide 
Range on Protein: 428-504
Range on HMM: 100-166/254
Sequence Identity: 31% (24 aa)

EVIDILRQSVTALRLMFCAGWVHRDVSTGNILALKTGSSSSWQVKLSDLEYSRRFPDTNLSDGEQIMGTPYFMACEI
|.  | .. . .|| .     .|||.  ||||    |     ||||.|         .  .  .  .||||.|| |.
EIAAICHGALQGLRYLHSHKMIHRDIKAGNILLTEHG-----QVKLADFGSA-----SMVCPANSFVGTPYWMAPEV
Kinase CC1G_13268.AA SLK 432-504 30 8.2e-05 12.04 In-house 102-168 (259) Show / Hide 
Range on Protein: 432-504
Range on HMM: 102-168/259
Sequence Identity: 30% (22 aa)

ILRQSVTALRLMFCAGWVHRDVSTGNILALKTGSSSSWQVKLSDLEYSRRFPDTNLSDGEQIMGTPYFMACEI
. .. . ||. .     .|||.  ||||    |     .|.| |   | .   | .   .  .||||.|| |.
VCKHMCEALNWLHSNKVIHRDLKAGNILMTMDG-----DVRLADFGVSAKNKHT-MQKRDTFIGTPYWMAPEV