Gene CC1G_07033 (C.cinerea)

CC1G_07033

Species: C.cinerea
Alias: CC1G_07033
External Links:
Annotation:

Classification

Group: Other
Family: FunK1

Sequence

Name Sequence Type Origin Length Description Download
CC1G_07033.AA Protein None 723 None Fasta, JSON
CC1G_07033.NA RNA None 2172 None Fasta, JSON
CC1G_07033.kin_dom Protein Kinase Domain None 416 None Fasta, JSON

Protein domain

Protein domains of CC1G_07033.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
S_TKc CC1G_07033.AA S_TKc 265-590 11 1.2e-05 -94.21 SMART 13-231 (231) Show / Hide 
Range on Protein: 265-590
Range on HMM: 13-231/231
Sequence Identity: 11% (42 aa)

SRVWKVEQVTSASDPQRVLGTSTMVLKDSSIDALAPVESDVQDRLFGDITDFARSKNWRSHPLLKDANNDDLHALGEALKGDNFKQFFSCIVSKHVSLID
..|.|.  .              . .|  .                                   .     .  | .  . .|  ... ....   .|  
GKVYKCRHKK---------TGRIVAIKIIK-----------------------------------EHIRREIQILKK--HHPNIVKLYDVFQD--DHLYM

PISNMDQ--GTDRHRRVRLVYENVCTALHDIPTLGEAIDIVKQTLLGLCLMFCAGWVHRDLSPGNILAFRATLNSPWHAKISDLEFARRFPASGVVTVSE
    .|.  |. ... ..  ..  .  .    .  .|  ...|....|  .   | .|||| | |||  .       | ||.|  .||..          
VMEYCDGDLGDLFDYIKKRGRHGLRFPF----PE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDE-------HIKICDFGLARQL---------T

QLTGTPHFMAYELLHSRHLLPKYTP----------------TGER-FPIDPESLVIHNYQHDLESIWWIILWLVGTRVKEKLPRTFSEMFQQHVNGPYAK
 . |||..|| |.|       .|..                .|.  ||             ... .. .|.                             
TFCGTPWYMAPEVL-------GYGKCKCDWWSCGCILYEMLCGYPPFP-------------QMQMMFKKIG-----------------------------

ARHYVLTYPLTRAGDLLRSLPQSLRSSAFLNALD-------TLRQDLH-------HQYI
                    ......    . |.       |  . |.       |...
--------------------SPEAKD-FIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF
Kinase CC1G_07033.AA CAMK 419-472 24 1.2e-05 13.38 In-house 201-287 (425) Show / Hide 
Range on Protein: 419-472
Range on HMM: 201-287/425
Sequence Identity: 24% (21 aa)

VHRDLSPGNILAFRATLNSP------------WHAKISDLEFARRFPASGVVT---------------------VSEQLTGTPHFMA
||||| | |||      .|.            .  ||.|  ||..|. .   .                       .   |||..||
VHRDLKPENILLDDNNDDSDPVEHDEIFDWNNNNIKIIDFGFANKFDPGENNFMCSDYKGGEMHNQWTTPTEGQKMKTFCGTPEYMA
Kinase CC1G_07033.AA TKL 419-472 25 4.7e-05 14.14 In-house 162-241 (364) Show / Hide 
Range on Protein: 419-472
Range on HMM: 162-241/364
Sequence Identity: 25% (20 aa)

VHRDLSPGNILAFRA---------TLNSPWHAKISDLEFARRFPASGVVTVSEQ-----------------LTGTPHFMA
.|||| . ||| ..            |..|..||.|. ..|..  ||  . ..                    ||| .||
IHRDLKSKNILVDENWTNVSNYMYNPNADWCCKICDFGLSRFMSQSGNMNDTMTTMMESAEHQNNRKTTMTQCGTPRWMA