Gene CC1G_07007 (C.cinerea)

CC1G_07007

Species: C.cinerea
Alias: CC1G_07007
External Links:
Annotation:

Classification

Group: Other
Family: FunK1

Sequence

Name Sequence Type Origin Length Description Download
CC1G_07007.AA Protein None 677 None Fasta, JSON
CC1G_07007.NA RNA None 2034 None Fasta, JSON
CC1G_07007.kin_dom Protein Kinase Domain None 355 None Fasta, JSON

Protein domain

Protein domains of CC1G_07007.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase CC1G_07007.AA CAMK 407-467 21 4.2e-05 11.62 In-house 201-310 (425) Show / Hide 
Range on Protein: 407-467
Range on HMM: 201-310/425
Sequence Identity: 21% (24 aa)

VHRDVSPGNILAYRQAPGSP------------WTVKLSDLEHAKKFPDPESTGGDR----------------------ITGTPYFIA-CEVLDG------
||||  | |||     ..|.            ...|..|   |.||.. |.   ..                        |||...|  ||| |      
VHRDLKPENILLDDNNDDSDPVEHDEIFDWNNNNIKIIDFGFANKFDPGENNFMCSDYKGGEMHNQWTTPTEGQKMKTFCGTPEYMAAPEVLNGKGHCNM

--------DY
        .|
QNATDEEKPY
Kinase CC1G_07007.AA MAPKAPK 408-464 32 0.000215 9.02 In-house 126-187 (292) Show / Hide 
Range on Protein: 408-464
Range on HMM: 126-187/292
Sequence Identity: 32% (21 aa)

HRDVSPGNILAYRQAPGSPWTVKLSDLEHAKK------FPDP-ESTGGDRITGTPYFIACEVLD
|||. | |||   ... .|  |||.|.  ||.       ..| ...      .|||..| ||..
HRDLKPENILCTDTNHNCP--VKLCDFGFAKEIHLNHDCTTPITTPELMTPCYTPYYMAPEVVG
Kinase CC1G_07007.AA TAO 390-463 32 0.000417 8.99 In-house 104-167 (254) Show / Hide 
Range on Protein: 390-463
Range on HMM: 104-167/254
Sequence Identity: 32% (24 aa)

VLRQALIPLRLMFCAGWVHRDVSPGNILAYRQAPGSPWTVKLSDLEHAKKFPDPESTGGDRITGTPYFIACEVL
. ..||  || .     .|||.  ||||   ..     .|||.|   |  . .|  .      ||||..| ||.
ICHGALQGLRYLHSHKMIHRDIKAGNILLTEHG-----QVKLADFGSA-SMVCPANS----FVGTPYWMAPEVI
Kinase CC1G_07007.AA Ciliate-E2 407-465 24 0.000808 8.97 In-house 183-261 (365) Show / Hide 
Range on Protein: 407-465
Range on HMM: 183-261/365
Sequence Identity: 24% (22 aa)

VHRDVSPGNILAYRQAPGSPWTVKLSDLEHAKKFPDP-------------------ESTGG-----------DRITGTPYFIACEVLDG
.|||  | |||           .|..|.  .||. |.                   . | |           ..| |||.. | |.| |
IHRDIKPENILF----------IKIIDFGLSKKYDDDNQNRTHKQQCKWYMFKNDTSRTPGYMDQIIQQNMFNTICGTPGYMAPEILNG