Gene 17202 (Tetrahymena)

17202

Species: Tetrahymena
Alias: 17202, PreTt17202, 275, 3761.m00254, 191.m00062, TTHERM_01002820
External Links: Tetrahymena Genome Database (TGD)
Annotation:

Classification

Group: Atypical
Family: HisK

Sequence

Name Sequence Type Origin Length Description Download
17202.AA Protein None 1221 None Fasta, JSON
17202.kin_dom Protein Kinase Domain None 114 None Fasta, JSON
17202.NA RNA None 3666 None Fasta, JSON

Protein domain

Protein domains of 17202.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
HisKA 17202.AA HisKA 515-597 27 1.6e-10 39.62 Pfam 1-69 (69) Show / Hide 
Range on Protein: 515-597
Range on HMM: 1-69/69
Sequence Identity: 27% (23 aa)

YKNRMLSSVTHELRTPLNCSIQMLELLQL--KLNEDQFYKVQQKEEQINPIIEAKEQFLKPALLSNYLLLNIINDILDYGQINSG
 |...|... |||||||.  . ..||||   .|...|                  ...|. .. .   ....|||.||. .| .|
AKRQFLANMSHELRTPLTAIRGYAELLQDYTDLDPEQM----------------RREYLETIQREAQRMQRLINDLLDFSRIEAG
HisKA 17202.AA HisKA 515-597 22 1.8e-07 32.06 SMART 1-89 (89) Show / Hide 
Range on Protein: 515-597
Range on HMM: 1-89/89
Sequence Identity: 22% (21 aa)

YKNRMLSSVTHELRTPLNCSIQMLELLQLKLNEDQFYKVQQKEEQINPIIEAK-----------EQFLKPALLSNYLLLNIINDILDYGQINSG
 |...|... |||||||.  . ..|||| ...      .   ...  .  ...           ...|. .. .   ....|||.||. .| .|
AKRQFLANMSHELRTPLTAIRGYAELLQDWYYK-----QRYHHWTDLDPEQRLPMLRREFNCEYREYLETIQREADRMQRLINDLLDLSRIEAG
Kinase 17202.AA HisK 644-757 36 6.3e-60 205.41 In-house 1-164 (164) Show / Hide 
Range on Protein: 644-757
Range on HMM: 1-164/164
Sequence Identity: 36% (60 aa)

SDQNRIKQVLLNLLSNSLKFTEEG------HIEINVQRES--------------------------NELIRIDVCDTGVGIPKNNLYKIFDCFG------
||.|||||.|.||.||.||||..|      .|.|.|.  .                          ..||.|.| |||.|.|.... |||. ||      
SDPNRIKQILINLISNALKFTQKGGIPFQGYIKIKVEQINTQNNIKYNSIFIQKIQENMVQEQLQQKNLIQISVQDTGCGMPEEQQKKIFKMFGNIDDQH

------DKSKQSILNTRGAGLGLSIANSLAMGLG------GNRRIQVVSKENQGTIFSFFIINR
      .  ..  .|. |.||||.|.|.||.|||      ||| |||.|....|..|||.| |.
QMIKKTFNHQNKKNNQHGCGLGLTICNNLAKGLGPEHNQNGNRGIQVQSEVGKGSTFSFYIYNN
Kinase 17202.AA HATPase_c 644-757 33 2e-25 90.74 Pfam 1-120 (120) Show / Hide 
Range on Protein: 644-757
Range on HMM: 1-120/120
Sequence Identity: 33% (41 aa)

SDQNRIKQVLLNLLSNSLKFTEE-GHIEINVQRESNELIRIDVCDTGVGIPK------NNLYKIFDCFGDKSK-QSILNTRG--AGLGLSIANSLAMGLG
 |..|..||..||..|..|.|.| |||.. | |.  . .|| | |.|.|||.       .. .||. |.  ..  .  .. |   ||||.|.. ..  .|
GDPDRLHQVVWNLVDNAIKHTPEGGHITVRVHRDD-DHVRITVEDNGPGIPPEMHSIAEDIPRIFEPFYRTDPDSR-RKYGGGLTGLGLYICRRIVEQHG

GNRRIQVVSKENQGTIFSFFIINR
|   |.| |....|| |.| .  .
GT--IWVESEPGGGTTFTFTLPLE
Kinase 17202.AA HATPase_c 644-758 27 1.2e-24 89.15 SMART 1-130 (130) Show / Hide 
Range on Protein: 644-758
Range on HMM: 1-130/130
Sequence Identity: 27% (40 aa)

SDQNRIKQVLLNLLSNSLKFTEE--------------GHIEINVQRESNELIRIDVCDTGVGIPK------NNLYKIFDCFGDKSK--------QSILNT
 |..|..|||.|||.|..|.|.|              |.|.. |        || | |.|.|||.        . .||. |.  ..        ..  ..
GDPDRLRQVLWNLLDNAIKHTPEGHADPDLHDGKPGGGRITVRVH-------RITVEDNGPGIPPEMHKSIEDIPRIFEPFYRTDDSPSRMCPDSRSRKY

RG--AGLGLSIANSLAMGLGGNRRIQVVSKENQGTIFSFFIINRQ
 |   ||||||.....  .||   |.|       | |.| .  ..
GGGLTGLGLSICKRIVEQHGGT--IWVE------TTFTFTLPLER
REC 17202.AA REC 1080-1204 21 1.8e-23 85.24 SMART 1-150 (150) Show / Hide 
Range on Protein: 1080-1204
Range on HMM: 1-150/150
Sequence Identity: 21% (35 aa)

TQILVVDDN----DFNLYVLF------LRLKTYGFK--------IEKAGSGE-------IAIQKVRQK------LNSQECCRKYKLIFMDIDMP------
  ||.|||.      .. .|       . |.  |.         .. | .||        |.......        .     .. ||.||| ||      
MRILIVDDDPAMAPVIREMLRNYTVIQRLLEKEGYENKMWMVEVVDEA-DGETLMNEIWEALELLQEHRDKKEDATTD-QSEPPDLIIMDIMMPGDPFED

-VKDGHQTTAEINNFFLNQNMQPPPISAYTAYVQQKEINKAFESGMKYYITKPINQKDLEEVL
   || ... .|            || . ||. .   . .|.|.|.  |||||.....| ...
GGMDGIELCRRIR-----------PIIMLTAHDDEEDRVRALEAGADDYITKPFDPEELLARI
Response_reg 17202.AA Response_reg 1082-1205 25 9.6e-18 66.13 Pfam 1-115 (115) Show / Hide 
Range on Protein: 1082-1205
Range on HMM: 1-115/115
Sequence Identity: 25% (33 aa)

ILVVDDNDFNLYVLFLRLK-TYGF-KIEKAGSGEIAIQKVRQKLNSQECCRKYKLIFMDIDMPVKDGHQTTAEI-NNFF-LNQNMQPPPISAYTAYVQQK
.|.|||.. .. .|   |.  .|. ... | .|| |.......         . ||.|||.||  || .....|  .    .     .|| . ||. .  
VLIVDDHPLMREGLRQILEQKEGYEVVAEADDGEEALEWWQEHH--------PDLIIMDINMPGMDGLELCRRIRRQHPHPQ-----TPIIMCTAHGDED

EINKAFESGMKYYITKPINQKDLEEVLY
 . .|.. |. .|||||... .| . . 
DAVEALQAGANDYITKPFDPDELHAAIR