Gene AdckB2 (Slime mold)

AdckB2

Species: Slime mold
Alias: abkD, DDB0216431, DdisK249, AdckB2
External Links: DictyBase Link ,
Annotation:

Classification

Group: Atypical
Family: ABC1
Subfamily: ABC1-D

Sequence

Name Sequence Type Origin Length Description Download
AdckB2.AA Protein None 695 None Fasta, JSON
AdckB2.kin_dom Protein Kinase Domain None 8 None Fasta, JSON

Protein domain

Protein domains of AdckB2.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Kinase AdckB2.AA ABC1-B 305-421 40 8.6e-53 181.71 In-house 1-125 (125) Show / Hide 
Range on Protein: 305-421
Range on HMM: 1-125/125
Sequence Identity: 40% (51 aa)

KDLGNAPNHYFSDFDRLPIAAASLAQVHRAITKEGEEVAVKVQYVDLQRNFDGDIFTHNVLLTLVNMAFP------DFEFNWMAEEMKNVLIKELDFSQE
||||  .   || ||  |||||||||||||  ..||.||||||. .|. .|..|.... ... ..  .||      .|.| |  .| . .| .||||  |
KDLG-NIEDVFSEFDQKPIAAASLAQVHRAKLHDGETVAVKVQHPWLRKQFHYDMMMMELFVKVCDWFFPKSPDFKEFPFMWFHDEIQKNLPQELDFYNE

ADNAERAAQDLS---SNNNAYIPKVF
| |||...| ..      . |.|...
ARNAEKCRQMFKKFKHFDFLYVPRIH
Kinase AdckB2.AA ABC1 305-421 36 1.7e-44 154.14 In-house 1-123 (123) Show / Hide 
Range on Protein: 305-421
Range on HMM: 1-123/123
Sequence Identity: 36% (45 aa)

KDLGNAPNHYFSDFDRLPIAAASLAQVHRAITKEGEEVAVKVQYVDLQRNFDGDIFTHNVLLTLVNMAFP-----DFEFNWMAEEMKNVLIKELDFSQEA
.|||  .   || ||  |.||||.||||||  |.|..||||||. ... ....||... .........||     .|.. |  .| . .| .|.||  ||
QDLG-NWEDVFSEFDEKPFAAASIAQVHRAKLKDGQTVAVKVQHPGVREQIHYDINNMEMVVKMCDWFFPGPDFKWFFLMWFVDEFQKELPWECDFNNEA

DNAERAAQDLS--SNNNAYIPKVF
 |||...| ..     . |.|...
RNAEKCRQLFKKFHWPFFYVPRIH
Kinase AdckB2.AA ABC1 305-421 38 6.4e-41 139.86 Pfam 1-126 (126) Show / Hide 
Range on Protein: 305-421
Range on HMM: 1-126/126
Sequence Identity: 38% (48 aa)

KDLGNAPNHYFSDFDRLPIAAASLAQVHRAITKE-GEEVAVKVQYVDLQRNFDGDIFTHNVLLTLVNMAFPD-----FEFNWMAEEMKNVLIKELDFSQE
..||  .   |. ||. ||||||.|||||| .|  |||||||||. ....... || .  .....|.  ||.     |.. |...|..  |..|||. .|
EELGCPWEEIFQEFDEEPIAAASIAQVHRARLKDDGEEVAVKVQHPGVKKRMMRDIYNMRWMAKWVKRFFPGYRRQRFDLMWIVDEFRKNLPWELDYRRE

ADNAERAAQDLSSN---NNAYIPKVF
| |.|| ....  .    . |.|||.
AKNMERFRENFRHWHRQPWVYVPKVY
Kinase AdckB2.AA ABC1-A 318-348 58 1.2e-11 36.8 In-house 1-31 (216) Show / Hide 
Range on Protein: 318-348
Range on HMM: 1-31/216
Sequence Identity: 58% (18 aa)

FDRLPIAAASLAQVHRAITKEGEEVAVKVQY
|   | |.||  |||.|  | | |||||.||
FEEMPFACASIGQVHQAVLKDGREVAVKIQY
Kinase AdckB2.AA ABC1-A 416-437 40 0.002221 7.87 In-house 99-120 (216) Show / Hide 
Range on Protein: 416-437
Range on HMM: 99-120/216
Sequence Identity: 40% (9 aa)

YIPKVFRPYSSKRILTTEFIHG
|.|.|.  |.. |.||.| . |
YVPHVIDEYCTDRVLTMELMYG
Kinase AdckB2.AA ABC1-A 494-521 35 4.7e-05 13.74 In-house 189-216 (216) Show / Hide 
Range on Protein: 494-521
Range on HMM: 189-216/216
Sequence Identity: 35% (10 aa)

QPQIVLLDHGLYREYDEEFRLNFCNLYK
|....||| |  |||...| .   .. |
QHKVELLDFGASREYGKDFTDHYMQIIK