Gene PDGFRb (Human)
PDGFRb
Sequence
Protein domains of PDGFRb.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.
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Domain | Protein name | Domain Name | Range | Identity (%) | Significance | Score | Profile Source | Profile Range (length) | Alignment |
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IG | PDGFRb.AA | IG | 39-121 | 17 | 2.8e-05 | 24.8 | SMART | 1-58 (58) | Show / Hide |
Range on Protein: 39-121 Range on HMM: 1-58/58 Sequence Identity: 17% (15 aa) GPELVLNVSSTFVLTCSGSAPVVWERMSQEPPQEMAKAQDGTFSSVLTLTNLTGLDT---GEYFCTHNDSRGLETDER-KRLYIFVP | .. .. .| .||| | . | ||. |.. |. |.|.|. . ... . .. | PP-VTVKEGETVTLTC-VS-QIWWY---------------------LTI-NVQPEDSQQHGTYYCQAT----HGQYWSIQGTTLTVQ |
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IGc2 | PDGFRb.AA | IGc2 | 45-107 | 22 | 0.000308 | 15.51 | SMART | 1-56 (56) | Show / Hide |
Range on Protein: 45-107 Range on HMM: 1-56/56 Sequence Identity: 22% (15 aa) NVSSTFVLTCS----GSAPVVWERMSQEPPQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRG . ...||| . . | . .|. | .. ||..| | | |.| |. . | HEGQSVTLTCPATGNPDPNIHWYK-GQPLP----------WNWTLTIKNVTPEDSGYYTCYARNPWG |
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V-set | PDGFRb.AA | V-set | 32-100 | 18 | 0.001368 | 14.21 | Pfam | 1-110 (128) | Show / Hide |
Range on Protein: 32-100 Range on HMM: 1-110/128 Sequence Identity: 18% (20 aa) GLVVTP-PGP----ELVLNVSSTFVLTCSGS-------AP--VVWER-MSQ-EPPQEMA------KAQ----------DGTFS-----S----VLTLTNL ..||. | . ... .. . |.|. | .. . | | .. ..||... ... |... | ||..|| QSQVTQHPPRGCPWWVTVQEGQSVTLPCHYSDDYTCWEHNFYIYWYRQQPPGQKPQWIISYYTHYYYNFGHGYYYPRFKGRVTFSGNPSKNDFSLTISNL TGLDTGEYFC . |.| |.| QPSDSGTYYC |
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IGc2 | PDGFRb.AA | IGc2 | 226-298 | 24 | 9.2e-14 | 52.97 | SMART | 1-56 (56) | Show / Hide |
Range on Protein: 226-298 Range on HMM: 1-56/56 Sequence Identity: 24% (18 aa) RQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVN ..|...|| |.. ||.. |. |.. . .| .. |.| ....||||.||| .. ... HEGQSVTLTCPATGNPDPNIHWYK----GQPLP-------------WNWTLTIKNVTPEDSGYYTCYARNPWG |
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IG | PDGFRb.AA | IG | 220-311 | 21 | 8.3e-13 | 49.8 | SMART | 1-58 (58) | Show / Hide |
Range on Protein: 220-311 Range on HMM: 1-58/58 Sequence Identity: 21% (21 aa) AVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDS---GTYTCNVTESVNDHQDEK--AINITVV ..|. ||..|| | | .. |. |.| ....||| |||.| .| .|... ...|| PP-VTVKEGETVTLTC-VS-----QIWWY---------------------------LTI-NVQPEDSQQHGTYYCQAT----HGQYWSIQGTTLTVQ |
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V-set | PDGFRb.AA | V-set | 276-310 | 34 | 2.5e-05 | 20.23 | Pfam | 95-128 (128) | Show / Hide |
Range on Protein: 276-310 Range on HMM: 95-128/128 Sequence Identity: 34% (12 aa) LHIPSAELEDSGTYTCNVTESVNDHQDEKAINITV |.| .....|||||.| |. . | .. .. .. || LTISNLQPSDSGTYYCAVWNC-NEDYFGHGTRLTV |
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I-set | PDGFRb.AA | I-set | 276-294 | 42 | 0.005019 | 12.78 | Pfam | 60-78 (92) | Show / Hide |
Range on Protein: 276-294 Range on HMM: 60-78/92 Sequence Identity: 42% (8 aa) LHIPSAELEDSGTYTCNVT | | .. .|.|.||| .| LTISNVQPDDEGKYTCVAT |
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IGc2 | PDGFRb.AA | IGc2 | 331-403 | 17 | 0.002227 | 7.29 | SMART | 1-56 (56) | Show / Hide |
Range on Protein: 331-403 Range on HMM: 1-56/56 Sequence Identity: 17% (13 aa) HRSRTLQVVFE--AYPPPTVLWFKDNRTLGDSSAGEIALSTRNVSETRYVSELTLVRVKVAEAGHYTMRAFHEDA | .... . ..| |.. |.| . | . ..||. .|... .|.|| .| .. HEGQSVTLTCPATGNPDPNIHWYK-GQPLP------------------WNWTLTIKNVTPEDSGYYTCYARNPWG |
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IG | PDGFRb.AA | IG | 325-416 | 10 | 0.011654 | 14.04 | SMART | 1-58 (58) | Show / Hide |
Range on Protein: 325-416 Range on HMM: 1-58/58 Sequence Identity: 10% (10 aa) LQFAELHRSRTLQVVFEAYPPPTVLWFKDNRTLGDSSAGEIALSTRNVSETRYVSELTLVRVKVAEA---GHYTMRAFHEDAEVQLSF--QLQINVP . . . |.. . .. |. ||. .|... . | |. .| | . .. | PP-VTVKEGETVTLTC-VS---QIWWY-----------------------------LTI-NVQPEDSQQHGTYYCQAT----HGQYWSIQGTTLTVQ |
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I-set | PDGFRb.AA | I-set | 335-398 | 26 | 0.018219 | 10.88 | Pfam | 19-77 (92) | Show / Hide |
Range on Protein: 335-398 Range on HMM: 19-77/92 Sequence Identity: 26% (17 aa) TLQVVFEAYPPPTVLWFKDNRTLGD-SSAGEIALSTRNVSETRYVSELTLVRVKVAEAGHYTMRA .... . .|||.| ||||.. | |. . . .. . || .|. . .| || .| RFECQVTGDPPPQVSWFKDGQPLRPDSDRHQMTYDG------DGTYTLTISNVQPDDEGKYTCVA |
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Kinase | PDGFRb.AA | PDGFR | 600-958 | 65 | 1.7e-292 | 950.26 | In-house | 1-358 (358) | Show / Hide |
Range on Protein: 600-958 Range on HMM: 1-358/358 Sequence Identity: 65% (238 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHT |..|.||||||||.||||||.|||.|||.|||||||||.||.||||.|||||||||||||.|.|.||||||||.|||||||||||.||||..||||..|. LQFGKTLGSGAFGKVVEATAYGLSKSQAVMKVAVKMLKPTAHSSEKEALMSELKIMSHLGQHMNIVNLLGACTHGGPIYIITEYCCYGDLLNYLHRKRHS FLQHHSDKRRPPSAELYSNAL-PVGLPLPSHVSLTGESDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVPSAPERTCRATLINE-SPV |.|||..| |..|..||.. |.. .....|....|.||.|||||..|...|||||..||..||.|....|||.|..||..|..|......|... |.| FHQHHPEK---PKKETWSNQQDPHNFSFYKNVHHHKENDGDYMDMSSCEDSQYVPMLMHKGVDKYVDMQRNNYMSPHSNYEDSYIEQDVKNELMEDDSNV LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIF |.|.||..||||||.|||||||||||||||||||||.|.||.|||||||||||||.||||..||...||.|||||||||...|||.|||||.|||||||| LTYWDLLCFSYQVAKGMEFLASKNCVHRDLAARNVLLCHGKVVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTTQSDVWSYGILLWEIF TLGGTPYPELPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLL .|||.|||..|....||..||.|||||||.||..||||||||||....| ||.|.||...| SLGGNPYPGMPVDSKFYKMIKEGYRMAQPFHAPEEIYEIMQKCWDFDPEKRPTFQQLCQFL |
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Kinase | PDGFRb.AA | Pkinase_Tyr | 600-958 | 36 | 2.7e-155 | 526.59 | Pfam | 1-270 (270) | Show / Hide |
Range on Protein: 600-958 Range on HMM: 1-270/270 Sequence Identity: 36% (133 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSE--KQALMSELKIMSHLGPHLNVVNLLGACT-KGGP--IYIITEYCRYGDLVDYLH ...|..||.||||.|...|..| .... ...||||||| .| ... ....|.|.|||..|| | |.|.|.|.|| .|.| |||..||. .||| |||. ITFGKKLGEGAFGEVYKGTWKG-DPDNTKIPVAVKMLKEGAMHEQNCREDFMREAKIMKQLGHHPNIVRLYGVCTDQGEPNQIYIVMEYMPHGDLLDYLR RNKHTFLQHHSDKRRPPSAELYSNALPVGLPLPSHVSLTGESDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVPSAPERTCRATLINE ... .. KHR-----------------------------------------------------------------------------------------------ED SPVLSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY-ISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILL . |. ||.....|.|.|||.|.||||.||||||||.|. |.. ||||||||||||. |..| ..|.. || ||||||.|... .|| |||||||.|. KQPLTMKDLLQMCWQIAKGMEYLESKNCIHRDLAARNCLVTENNVVKICDFGLARDIYNDDYYYRKRGGGKLPIKWMAPECINYGKFTTKSDVWSFGVLM WEIFTLGGTP-YPELPMNEQFYNAI-KRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLL |||||.|..| ||.. ||..|..| ..||||..| ...||||..|..||... | || ||... | WEIFTYGEQPTYPGM-SNEEVYEYIYEDGYRMPCPENCPDEIYDLMKQCWHYDPEDRPTFSEIHEQL |
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Kinase | PDGFRb.AA | TyrKc | 600-958 | 32 | 1.7e-137 | 464.03 | SMART | 1-280 (280) | Show / Hide |
Range on Protein: 600-958 Range on HMM: 1-280/280 Sequence Identity: 32% (126 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLG-PHLNVVNLLGACTKG-------GPIYIITEYCRYGDLVD ..||..||.||||.|...|. ..|||||||. | ....|.|..||..|| | |.|.|.|.||.. .|..|..||. .||| | ITLGKKLGEGAFGEVYKGTWK--------IQVAVKMLKEDA----REDFMREARIMCKLGGHHPNIVRLYGVCTQQGRNFMYIEPLMIVMEYMPHGDLKD YLHRNKHTFLQHHSDKRRPPSAELYSNALPVGLPLPSHVSLTGESDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVPSAPERTCRATL ||...... YLRKHRPK-------------------------------------------------------------------------------------------- INESPVLSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRD------SNYISK----GSTF-LPLKWMAPESIFNSLY |. ||. |..|.|.|||.|.||||.||||||||.|. |.. |||.||||.||| | . |..| |. . ||..|||||.|. . . ------LCMKDLLSFCWQIACGMEYLHSKNCIHRDLAARNCLVGENHTVKISDFGLSRDIYDDDQQGESKDYYRKKEHKGGKTMLPIRWMAPECINYGKF TTLSDVWSFGILLWEIFTLGGTPYPEL----PMNEQFYNAIKRGYRMAQPAH--------ASDEIYEIMQKCWEEKFEIRPPFSQLVLLL || |||||||...|||||.|..|||. |.. .. .|.|||| ||.. ..||.|.||..||.|. | || ||... .. TTKSDVWSFGVCMWEIFTYGQQPYPGMIQQMMSNQEVIEYVKQGYRMPQPPNDYPMSFVCCPDEMYQIMKQCWHEDPEDRPTFSEIHECF |
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Kinase | PDGFRb.AA | TK | 600-958 | 25 | 7.89999999999e-128 | 430.9 | In-house | 1-486 (486) | Show / Hide |
Range on Protein: 600-958 Range on HMM: 1-486/486 Sequence Identity: 25% (137 aa) LVLGRTLGSGAFG---QVVEATAHGLS--------------------HSQATMKVAVKMLKSTARSSEKQALM----------------SELKIMSH-LG ..||..||.|.|| .| .....|.. .......|||||||... .|... .. .|.|.|.| || ITLGKKLGEGQFGSFGEVYKGEWRGRNPWNGKRFPCHMTVTLKCKNGKEGGKTPVAVKMLKEGDAMSQEEFFDEEMHDRDGGEDFLEEAEEMKMMCHSLG PHLNVVNLLGACTKG------------GPIYIITEYCRYGD----LVDYLHRNKHTFLQHHSDKRRPPSAELYSNALPVGLPLPSHVSLTGESDGGYMDM | |.|.|.|.||.| .|..|..||. .|| | |||......| .. . . . .. ...|. | . .. HHPNIVRLYGVCTQGEPKPCFEVVVHQEPWMIVMEYMPHGDMDGSLRDYLRKCRPKFQHEQDCPDNQHNKYPPSK-L---H-HC---------------- SKDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVPSAPERTCRATLINE-SPVLSYMDLVG-------------------FSYQVANGMEFLASK--- | ||| | .| ...|.. ..|.. .|| . .| |. ||. ...|.|.|||.|.|| ----------M---KGD-----I---TY-SHESNSPC-PEEQDYDDDLIKDHPPPLTTKDLLQMAWQWCLTCKHQLTMHQLLMCWQIACGMEYLHSKNCE ---NCVHRDLAARNVLICEGKL-----------VKICDFG--------LARDIMRDSNYISKG------------------------STFLPLKWMAPES |.|||||||||.|..|.. .||.||| ||||| .|..| .|. .. ||..|||||. FIQNFVHRDLAARNCLVGENNVCKWHFDGCGPVCKIADFGLSRQGSGVLARDIYSDDDYYRKSSYGTGRPMWPFEDDPWQDYYRQQSGGKLPIRWMAPEC IF---------NSLYTTLSDVWSFGILLWEIFTLG-GTPYPELPM--------NEQFYNAIKRG--------------YRMAQPAHAS------------ .. . .|| |||||||.|.|||||.| ...|.... |..... ..|| .||.||.|.. LNDRVFSEAEKYGKFTTKSDVWSFGVLMWEIFTYGQEPYYGGMSNQDVWKDGDNQEVMEYLRRGGRLCRSGLNEVGYRMRMPQPPHCPDWMRYRMHPPHC --DEIYEIMQKCWEEKFEIRPPFSQLVLLL .|.|..||.||... | || ||||. | PPEEYYDLMQQCWHYDPEDRPTFSQLHEQL |
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Kinase | PDGFRb.AA | TK-Unique | 600-958 | 34 | 1.8e-112 | 379.95 | In-house | 1-294 (294) | Show / Hide |
Range on Protein: 600-958 Range on HMM: 1-294/294 Sequence Identity: 34% (129 aa) LVLGRTLGSGAFGQVVEATAHGLS-HSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGG-PIYIITEYCRYGDLVDYLHRNK |..|...|.|||||| ... |.. |. .. .||||||| |. .||....|...|..||.| |.|..||.||| . | .|| |||..|.| .||.... LEVGDVIGEGAFGQVWRGEVWGIWKHWDKQKCVAVKMLKDNATDTDKQDFLKEIQMMKELGDHPNIVQCLGCCTKSDEPWMIIMEYCPCGNLQHYLRTCR HT--------FLQHHSDKRRPPSAELYSNALPVGLPLPSHVSLTGESDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVPSAPERTCRA . |. . . .. PAMRQHQTYGNLK---------------------------------------------------------------------------------FDFHHM TLINESPVLSYMDLVGFSYQVANGMEFLAS--KNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGS-TFLPLKWMAPESIF--NSLY-TTL . ... .|. ||. | .|.|.|||.||| |..|||||.|||||. |.| .||||||.|||.. . |....| .|..||||||. | || PDKPRTEPISPKDLYHFAWQIACGMEYLASQRKKIVHRDLCARNVLLTEDKVCKICDFGMARDVYTNGVYSMMCSQGRIPIRWMAPESLKCYHGMYHTTK SDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAQPAHA-SDEIYEIMQKCWEEKFEIRPPFSQLVLLL |||||||.|.|||||||..|||..| . . ..|..|||| ||.| |.|.|..|. || .. | || |.|.. | SDVWSFGVLMWEIFTLGACPYPGMPWKD-IMECIRDGYRMPQPEHCCSHEMYNLMKSCWQWEPEERPSFRQIKHRL |
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Kinase | PDGFRb.AA | VEGFR | 802-958 | 59 | 2.3e-95 | 323.14 | In-house | 174-332 (332) | Show / Hide |
Range on Protein: 802-958 Range on HMM: 174-332/332 Sequence Identity: 59% (95 aa) DLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARD-IMRDSNYISKGS-TFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTL ||. .|.|||.|||||||..|.||||||||.|.|| . ||||||||||. | .| .| ||. . ||.||||||||| ||| |||||.|..|||||.| DLICYSFQVARGMEFLASRKCIHRDLAARNILLCENNVVKICDFGLARHGIYKDPDYVRKGDQGRLPIKWMAPESIFDKVYTTYSDVWSYGVFLWEIFSL GGTPYPELPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLL || ||| ..| |.| .| |||| | . |||.||. || . | || || || | GGSPYPGVQIDEEFCNRLKDGYRMRAPDYCTPEIYHIMLDCWHKEPEERPHFSELVEHL |
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Kinase | PDGFRb.AA | FGFR | 775-958 | 52 | 1.7e-84 | 286.98 | In-house | 113-293 (293) | Show / Hide |
Range on Protein: 775-958 Range on HMM: 113-293/293 Sequence Identity: 52% (96 aa) YDNYVPSAPERTCRATLINESPVLSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPES | .| |. || . || | |. ||| . |||| |||.|||. |.||||||||||. .. ||||||||||| | .. || ||||||. YTDYKPRKPEQQDDIELI---PNLTQKDLVSCAYQVARGMEYLASRKCIHRDLAARNVLVTDDYVMKICDFGLARDIHCIDYYRKTTNGRLPIKWMAPEA IFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLL | ||. |||||.|.|||||.|.||.||| | |. | | |.|| |.. | ||| .| || .| . ||.| ||| | LFDRVYTHQSDVWSYGVLLWEIMTYGGQPYPHIPSVEELYKYLKEGHRMEKPHNCSQEIYHMMCQCWHFKPCQRPTFKQLVEYL |
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Kinase | PDGFRb.AA | Src | 798-958 | 46 | 1.8e-69 | 235.18 | In-house | 94-255 (255) | Show / Hide |
Range on Protein: 798-958 Range on HMM: 94-255/255 Sequence Identity: 46% (76 aa) LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMR--DSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWE |. .|. .. |||.||..| |.| .||||||||||. |. ..|..|||||| .. | .| .. .| ||.||| | .|. ||||||||||.| LHLPQLIDMAAQVAEGMAYLESMNYIHRDLAARNVLVGENNVCKVADFGLAR-LIKEDDDEYCARHGAKFPIKWTAPEAINYGRFTIKSDVWSFGILLTE IFTLGGTPYPELPMNEQFYNAIKRGYRMAQPAHASDEIYE-IMQKCWEEKFEIRPPFSQLVLLL |.| | .||| .|.. ...||||| .|.. ||.|| ||..||... | || | | | IVTYGRVPYPGM-TNHEVLQQVERGYRMPCPHNCPDELYEQIMLQCWHKDPEQRPTFEYLQWFL |
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Kinase | PDGFRb.AA | UTK | 785-958 | 33 | 3.3e-67 | 228.94 | In-house | 102-296 (296) | Show / Hide |
Range on Protein: 785-958 Range on HMM: 102-296/296 Sequence Identity: 33% (66 aa) RTCRATLINESPVLSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEG-------KLVKICDFG---LARDIMR--------DS-NYISKGSTFL |..| |. . |. .........|.||..|.|...|||||||||.|... ..||.||| ..|.. . .| | . . . . RRHRPTPPACPHWLTLHQRLCMAWDIARGMQYLHSCGFVHRDLAARNCLVHMHRMMWHCMMVCKIADFGRGGMSRRVNTFHFSNRYWESYYYMAQHQDRW PLKWMAPESIFNS-LYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRG--YRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLL |..|||||.. . .||.|||||||...|||.| | .|||.. |.| .. .| |||..|.. ....|..|..||. . || | .|| . PIRWMAPEALTHHTRFTTKSDVWSFGVVCWEIWTWGRLPYPGM-SNMQVWHQVCNGGRYRMPCPWDCPHPVYRLMHRCWHYDPQERPDFEDLVQQM |
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Kinase | PDGFRb.AA | Tie | 792-958 | 47 | 1.8e-66 | 201.05 | In-house | 105-267 (267) | Show / Hide |
Range on Protein: 792-958 Range on HMM: 105-267/267 Sequence Identity: 47% (80 aa) INESPVLSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGI .| . || ...| ||.||..|. |.|.||||||||.|.|| . || ||||.| | |. | || .||| ||. | ||| |||||.|. VNVASTLSSQQILHFAADVARGMQYLSQKQCIHRDLAARNILVCENYVCKIADFGLSRG---DEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSYGV LLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLL ||||| .|||||| . | .|. . .|||| || ||.|..|..|| .. ||||.|... | LLWEIVSLGGTPYCGMTCAE-LYEKLPQGYRMEQPRNCDDEVYDLMRQCWRDRPYERPPFAQIAVQL |
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Kinase | PDGFRb.AA | RTKB | 785-958 | 44 | 1.9e-62 | 209.3 | In-house | 94-264 (264) | Show / Hide |
Range on Protein: 785-958 Range on HMM: 94-264/264 Sequence Identity: 44% (79 aa) RTCRATLINESPV-LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTL | |||. . | |. || |. |.|.|| || ..| .||||.|||||. . ||||||.|| | | .. | || |||||||. . ||| RMCRAS--QHNPQSLKQAQLVDFCHQIACGMAFLHQHNVIHRDLCARNVLVDQQLHCKICDFGMAREI--DHECYETTCTRLPIKWMAPESWAHRIYTTK S-DVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLL | ||||||. ||||.||||||.... | . . |.|. .| .. ....|||.|| . . || |. || .. SGDVWSFGVTMWEIFSLGGTPYQQYR-NGDIFYWLESGHRLPKPRQMPQAADHIMQMCWQMEAQHRPDFDELVDAF |
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Kinase | PDGFRb.AA | Ret | 802-960 | 45 | 2.8e-62 | 211.5 | In-house | 136-293 (293) | Show / Hide |
Range on Protein: 802-960 Range on HMM: 136-293/293 Sequence Identity: 45% (73 aa) DLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGG ... | |. || .|.. |||||||||||. ||.. || |||| ||. | |. . .| ||||.|| . ||| |||||||.|.||| |.|. MIISFAWQICKGMHYLSEMKLVHRDLAARNVLVAEGRICKISDFGLTRDVYEDDSYVKRSKDRIPVKWMAIESLYDHVYTTKSDVWSFGVLCWEIVTMGA TPYPELPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLER ||| | | .. | |||| | | |.| || .|| . . || | . .|. NPYPGIPP-ERLWQLLKTGYRMDRPENCSEEMYRIMRQCWKQEPDKRPVFKFISKDFEK |
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Kinase | PDGFRb.AA | VEGFR | 600-700 | 53 | 7.1e-53 | 181.97 | In-house | 1-104 (332) | Show / Hide |
Range on Protein: 600-700 Range on HMM: 1-104/332 Sequence Identity: 53% (56 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTK---GGPIYIITEYCRYGDLVDYLHRN | ||. || ||||||.||.| |. .. . |||||||..| .||. |||||||.. |.| ||||||.||.||| .|| .| |||..| | .|| LKLGKMLGRGAFGQVHEASAFGIRKMETCTTVAVKMLKEGATASEHRALMSELKMLIHIGHHLNVVNFLGCCTKNIQKGPLMVIVEYCCFGNLSNYLRTK KHTF .| RMYF |
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Kinase | PDGFRb.AA | Pkinase | 600-958 | 20 | 5.9e-40 | 142.36 | Pfam | 1-293 (293) | Show / Hide |
Range on Protein: 600-958 Range on HMM: 1-293/293 Sequence Identity: 20% (82 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQ--ALM-SELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYG----DLVDY ...||..|||.||.| ... .| .. .|||| .| ..|.|. .. ||..|| .| | |.| |..... .. ||...|||. | || || YHIGRKIGSGSFGCVYKCHHKGTGK-----IVAVKIIKKRHEKSWKDQTHRRLSEIQIMKRL-NHPNIVRLYDWFEDKDHIYMVMEYCEGGLYVMDLFDY LHRNKHTFLQHHSDKRRPPSAELYSNALPVGLPLPSHVSLTGESDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVPSAPERTCRATLI ... IST------------------------------------------------------------------------------------------------- NESPVL--SYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC-EGKL---VKICDFGLARD--IMRDSNYISKGSTFLPLKWMAPESIF-NSLYTTL .. .. |. .. . ||.. |.|.. |....|||| |.|| .| . |||||||||. . ..| . . | . .|||| | .. |.. WRHGCFYFSEWECKFYMYQILRGLEYCHSMGIIHRDLKPENILIDNNGHIDACVKICDFGLAKQFDY-NNS-MTTFCGT---PWYMAPEVIRGGQYYGPK SDVWSFGILLWEIFTLGGTPYPEL------PMNEQFYNAIKRGYRMAQPAHAS-------------------DEIYEIMQKCWEEKFEIRPPFSQLVLL- .|.||.|..|.| .. | .|.|. ... ... .. .. | | .| ... .|.. . . || . |.. VDMWSCGCILYEMLC-GRPPFPGHCWHDNHDQMQMICRIMGPPLHFDWPWWCSISYFFFRHWHFHWTFHNWSEECKDFIKWCLCKDPKKRPTAEQILQHP -L . WF |
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Kinase | PDGFRb.AA | FGFR | 600-696 | 44 | 1.1e-37 | 125.99 | In-house | 1-99 (293) | Show / Hide |
Range on Protein: 600-696 Range on HMM: 1-99/293 Sequence Identity: 44% (44 aa) LVLGRTLGSGAFGQVVEATAHGLSHS--QATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRN |.|| .|| |.||||. |.| |. . .....|||||||. . . | ||. .| | | |..||||.|| .|| |.| ||| | | |.| . LTLGKMLGEGCFGQVWMAEAKGIDCDRPEKEITVAVKMLKMNHTDKDLSDLVSEMEMMKMIGKHKNIINLLGCCTQEGPLYVIVEYCHHGNLRDFLRAR |
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Kinase | PDGFRb.AA | Tie | 609-693 | 40 | 5.1e-27 | 78.72 | In-house | 2-83 (267) | Show / Hide |
Range on Protein: 609-693 Range on HMM: 2-83/267 Sequence Identity: 40% (34 aa) GAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDYL | ||||. |. . |.||.||.| | ... | || .| .| | |..||.||| . | .|. .|| .|| |.|.| GNFGQVMKAM---IKKDGLKMEVAIKMMKEYASEDDHRDFMGELEVMCKVGHHPNIINLVGACEHRGYLYVAIEYAPYGNLLDFL |
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Kinase | PDGFRb.AA | Ret | 600-693 | 43 | 7.6e-27 | 88.68 | In-house | 1-96 (293) | Show / Hide |
Range on Protein: 600-693 Range on HMM: 1-96/293 Sequence Identity: 43% (42 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKST-ARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGG--PIYIITEYCRYGDLVDYL |.|. ||| | ||||| |.| . ||||||| | ||| .| ||. . . | .|. |.|||. . | .| |||.|| | .| LQLDDTLGEGHFGQVVKAQAFHIRGHPGYTTVAVKMLKRNTANSSEYHDLLSEFQLLKQVN-HPHVIKLYGACIQDDPFPTCLIVEYCKYGCLREFL |
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Kinase | PDGFRb.AA | UTK | 600-703 | 36 | 1.2e-23 | 77.77 | In-house | 1-111 (296) | Show / Hide |
Range on Protein: 600-703 Range on HMM: 1-111/296 Sequence Identity: 36% (40 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQA----LMSELK---IMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDY . |||.||.||||.| .|.. | .|.|||| ....| . ... .| | . .|... | ||..|.| ||...|..|.|||.. |||..| VQLGRQLGQGAFGEVHKARFTQCSEHMYEMDVAVKVCQHHADAQQEPEPYPDFMEEARELQMMKQFHWHPNVLRLVGVCTQEEPWMIVTEYMENGDLRSY LHRNKHTFLQH | |...|. .. LRRHRPTPPAC |
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Kinase | PDGFRb.AA | S_TKc | 600-962 | 18 | 2e-21 | 78.44 | SMART | 1-231 (231) | Show / Hide |
Range on Protein: 600-962 Range on HMM: 1-231/231 Sequence Identity: 18% (69 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRY--GDLVDYLHRNK ..|..|.||||.| .. .. .||.|..| . ...|..|... | |.|.|.... . .|...||| ||| ||..... YEILRKIGKGAFGKVYKCRHKK-----TGRIVAIKIIK--------EHIRREIQILKK--HHPNIVKLYDVFQD-DHLYMVMEYCDGDLGDLFDYIKKRG HTFLQHHSDKRRPPSAELYSNALPVGLPLPSHVSLTGESDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVPSAPERTCRATLINESPV . |.. . RHGLRF---------------------------------------------------------------------------------------------P LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTT-LSDVWSFGILLWEI .. . . ||.....|.. |.. .|||| |.|..| .||||||||| . . . .|||| . |.. .|.||.|..|.| FPE-HARFYMYQICCALEYCHSHGIIHRDLKPENILLDE--HIKICDFGLARQL---------TTFCGTPWYMAPEVL---GYGKCKCDWWSCGCILYEM FTLGGTPYPELPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVL-----LLERLL .. | .|.| .. .. |. |.| ....||.. | || .. . . LC-GYPPFP---QMQMMFKKIG-----------SPEAKDFIRKCLQKDPEKRPTA-EALQDEWDIKCHPWF |
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Kinase | PDGFRb.AA | Src | 600-697 | 37 | 1.2e-20 | 66.84 | In-house | 1-90 (255) | Show / Hide |
Range on Protein: 600-697 Range on HMM: 1-90/255 Sequence Identity: 37% (37 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLH-RNK . | | ||.| || | ... | ..||||| ||. . .|. | .|| | | ..|.|. |... ||||.||| . | | |||. . . IKLCRKLGQGQFGEVWMGYWNG------NTKVAVKTLKPGT--MSPEAFLQEAQIMKKLR-HEKLVQLYAVCSQEEPIYIVTEYMSHGSLLDYLKKDGE |
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Kinase | PDGFRb.AA | RTKB | 600-694 | 37 | 1.8e-20 | 65.76 | In-house | 1-94 (264) | Show / Hide |
Range on Protein: 600-694 Range on HMM: 1-94/264 Sequence Identity: 37% (36 aa) LVLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLH . ||. ||.||||.| | ..|. . .|.| || | . |.|. ||. .| ||.| ||. ..| | . | . |.| .| | |||. VWLGEKLGNGAFGEVFQAWVR-NRHMNTEQSCAAKVLKPGASYEERQDFCSEMTVMKELGWHPNVIGIIGHCLQDEPYILLVELCELGNLRDYLR |