Gene GL50803_4596 (G.lamblia)

GL50803_4596

Species: G.lamblia
Alias: GK313, GL50803_4596
External Links: GiardiaDB ,
Annotation:

Classification

Group: PKL
Family: CAK
Subfamily: ChoK

Sequence

Name Sequence Type Origin Length Description Download
GL50803_4596.AA Protein None 342 None Fasta, JSON
GL50803_4596.kin_dom Protein Kinase Domain None 201 None Fasta, JSON

Protein domain

Protein domains of GL50803_4596.AA. The domains are annotated by HMM profiles from Pfam and SMART, as well as in-house data which includes HMMs of each individual kinase group, family and subfamily. Here is domain list in details, including sequence identity, significance and alignment. In particular, you can find can find the best hit kinase group/family/subfamily, which is helpful to understand the relationship between kinases.Kinase domain and best hit kinase group/family/subfamily are highlighted in red and blue. Visualized by pviz.

Usage: Zoom in selected region by dragging mouse and zoom out by double-clicking.

Show/hide domain list
Domain Protein name Domain Name Range Identity (%) Significance Score Profile Source Profile Range (length) Alignment
Choline_kinase GL50803_4596.AA Choline_kinase 50-250 23 5.1e-56 197.22 Pfam 1-225 (225) Show / Hide 
Range on Protein: 50-250
Range on HMM: 1-225/225
Sequence Identity: 23% (55 aa)

SGSAYIVRFTRQS--RFQNYSVERKILSHVVGRSVATSQAYLFADGIVT--ACIEGHCIESDKMLGDSPYYELIARQMRRLHEISVQDDGASAMHLESHY
.. .|.||. .|.   | ..  | ... .   .... .  ..|..| |.   .||...  | ... |. .. .||..||..|.| ...        . ..
HPRKYLVRIYGQGTEHFIDRETEIVNFECLSEHGLGPKLYGFFPNGRVEVTEFIEHSRTLSCEDIRDPEISKKIAKRMREFHDIDMCH-------PHPWK

GLKSLLDISVDY---------------MGKGREAEVLYKLYSEDGVLGQLV-NNHPSLLWTCISHNDLHSGNIIY--CPSTQEVRFIDWEYSTYSINAFD
. ....|   ..               . |. . . .|.|. |   | ... |.| ..|| . .||||..|||.|  ...|....||||||..|   |||
KMPWCWDMMRKWFNLGNQEAQWHFEVNKRKHMKCINWYWLEKEINWLEKWLENFHSPGLWIVFCHNDLQYGNIMYIEDNETNCLMFIDWEYASYNYRAFD

IACFFLEFTG---------IDCEISAFPCASK
||..| |...         ..|..| .|.  .
IANHFCEWMYDYHWPEPPFHKCDYSKYPNREQ
APH GL50803_4596.AA APH 115-232 18 1.1e-07 27.04 Pfam 99-215 (248) Show / Hide 
Range on Protein: 115-232
Range on HMM: 99-215/248
Sequence Identity: 18% (24 aa)

YYELIARQMRRLHEISVQDDGASAMHLESHYGLKSLLDIS--VDYMGKGREAEVLYKLYSEDGV------LGQ-LVNNHPSLLW-TCISHNDLHSGNIIY
..| .||...|||....                . . ...  . |  . .... .. . .|..       | | | . .....  .|. |.|.|.||...
LLEALARFLARLHQVDPP--------------DCPFAWWGRWRLYHWRQLMDWCRCWVDPEWFDEDRQWWLWQRLWAWLEAHWPPPCWCHGDFHPGNVMW

CPSTQEVR---FIDWEYSTYSINAFDIACFF
 |  .. |   .|||.....   ..|.| ..
DPRPDGGRVTGVIDWDDACWGDPHYDLAMCW